Institute of Molecular Biology
Graduate
Admissions
University of Oregon
Karen Sprague, UO

Karen Sprague

Vice Provost of Undergraduate Studies

 

 

 

Oregon Hall, Education Support Services
Telephone: 541-346-6094

Professor of Biology
Willamette Hall Room 335
Telephone: 541-346-6094

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Research Interests

I have been interested in the regulation of transcription by eukaryotic RNA polymerase III. The genes encoding alanine tRNA in the silkworm, Bombyx mori are a striking example of regulated polymerase III activity. One class (C) is transcribed constitutively; the other (SG) is transcribed only in cells of the silk gland, where it contributes to efficient silk production. Our goals were to understand how differences in affinity for particular polypeptides and the spatial arrangement of bound proteins in the upstream promoter element resulted in the differential transcription of B. mori's two kinds of tRNA Ala genes.

Our approach included analyzing the function of cloned genes by transcribing them in vitro then introducing them into insect cells and site-directed mutagenesis in which we identified sequence and structural differences in the SG promoter.

Publications

Ouyang, C., J. Martinez, L.S. Young, and K.U. Sprague. (2000) TBP-TATA interaction is a key determinant of differential transcription of silkworm constitutive and silkgland-specific tRNA Ala genes. Mol. Cell Biol. 20, 1329-43.

Trivedi, A., L.S. Young, C. Ouyang, D.L. Johnson, and K.U. Sprague. (1999) A TATA element is required for tRNA promoter activity and confers TATA-binding responsiveness in Drosophila Schneider-2 cells. J. Biol. Chem. 274, 11369-75.

Ouyang, C. and K.U. Sprague.(1998) Cloning and characterization of the TATA-binding protein of the silkworm Bombyx mori. Gene 221, 207-13.

Young, L.S., N. Ahnert, and K.U. Sprague. (1996) Silkworm TFIIIB binds both constitutive and silkgland-specific tRNAAla genes, but protects only the constitutive promoter from DNase I cleavage. Mol. Cell. Biol. 16, 1256-66.

Smith, T.P., L.S. Young, and K.U. Sprague. (1995) Silkworm TFIIIA requires additional class III factors for commitment to transcription complex assembly on a 5S RNA gene, Nucl. Acids Res. 23, 1244-51.

Sprague, K.U. (1995) Transcription of eukaryotic tRNA genes. In: Transfer RNA, D. Söll and U.L. RajBhandary (eds.), ASM Press, Chapter 4, pp 31-50.

Sprague, K.U. (1995) Control of transcription by Bombyx mori RNA polymerase III. In: Molecular Model Systems in the Lepidoptera, M. Goldsmith and A. Wilkins (eds.), Cambridge University Press, Chapter 19, pp 273-91.

Dunstan, H.M., L.S. Young, and K.U. Sprague. (1994) tRNA plays an indirect role in silkworm class III transcription in vitro and inhibits low frequency DNA cleavage, Mol. Cell. Biol. 14, 3596-603.

Sullivan, H.S., L.S. Young, C.N. White, and K.U. Sprague. (1994) Silkgland-specific tRNAAla genes interact more weakly than constitutive tRNAAla genes with silkworm TFIIIB and polymerase III fractions. Mol. Cell. Biol. 14, 1806-14.

Dunstan, H.M., L.S. Young, and K.U. Sprague. (1994) TFIIIR is an isoleucine tRNA.  Mol. Cell. Biol. 14, 3588-95.

Sullivan, H., L.S. Young, C.N. White, and K.U. Sprague. (1994) Silk gland-specific tRNAAla genes interact more weakly than constitutive tRNAAla genes with silkworm TFIIIB and polymerase III fractions. Mol. Cell. Biol. 14, 1806-14.

Palida, F.A., C. Hale, and K.U. Sprague. (1993) Transcription of a silkworm tRNAAlaC gene is directed by two AT-rich upstream sequence elements. Nucl. Acids Res. 21, 5875-81.

Dieci, G., L. Duimio, F. Coda-Zabetta, K.U. Sprague, and S. Ottonello. (1993) A novel RNA polymerase III transcription factor fraction that is not required for template commitment. J. Biol. Chem. 268, 11199-207.

Young, L.S., D.H. Rivier, and K.U. Sprague. (1991) Sequences far downstream from the classical tRNA. Promoter elements bind RNA polymerase III transcription factors. Mol. Cell. Biol. 11, 1382-92.

Young, L.S., N. Takahashi, and K.U. Sprague. (1986) Upstream sequences confer distinctive transcriptional properties on genes encoding silkgland-specific tRNAAla. Proc. Natl. Acad. Sci. USA 83, 374-8.

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